Image3Dlinear.cpp

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/* ImLib3D
 * Copyright (c) 2001, ULP-IPB Strasbourg.
 *
 * This program is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 2 of the License, or (at
 * your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful, but
 * WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
 * General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
 */
#include<ImLib3D/Image3Dlinear.hpp>
#include<ImLib3D/FileConversion.hpp>
#include<ImLib3D/TemplateGroups.hpp>
#include<ImLib3D/SparseImage3D.hpp>


template<class ImageType>
void ReadFromFileAsImage3Df(const string &filename,Image3Df &res)
{
    ImageType ima(filename);
    res=ima;
}

template<>
void 
Image3Df::ReadWithImageTypeConversion(const string &fname0)
{
    printf("ReadWithImageTypeConversion\n");
    string fname=fname0;
#ifdef NOTDEF //FIXME
    if(!FileExists(fname) && FileExists(fname+".hdr") && FileExists(fname+".img"))
    {// this seems to be an avw image
        printf("ReadWithImageTypeConversion::avw detected\n");
        string tmp=WriteTmpFile("empty");
        IP3D::ReadFromFileAVWNT(Strings("CReadFromFileAVW",fname,tmp));
        fname=tmp;
    }
#endif// NOTDEF
    printf("ReadWithImageTypeConversion:: fname:%s\n",fname.c_str());
    string type=Container3D_ReadImageType(fname);
    if(type=="NOT IMLIB3D IMAGE"){ThrowError("ReadWithImageTypeConversion:: \"%s\" is not a valid image",fname);}
    CallWithImage3DFloatCastable_2(ReadFromFileAsImage3Df,type,fname,(*this));
    if(fname!=fname0){RemoveFile(fname);}
}



#ifdef NOTDEF
#include<ImLib3D/Image3Dlinear.hpp>
#include<ImLib3D/FileConversion.hpp>
#include<ImLib3D/TemplateGroups.hpp>
#include<ImLib3D/SparseImage3D.hpp>

// *******************************************************
// ********************** Mask3D **** ********************
// *******************************************************


void Mask3D::Invert()
{
    Mask3D::iteratorFast p;
    for (p=begin(); p!=end(); p++)
    {
        if (!(*p)) { (*p) = 1;}
        else       { (*p) = 0;}
    }
}



void 
Mask3D::Normalize()
{
    Mask3D::iteratorFast p;
    for (p=begin(); p!=end(); p++)
    {
        if (*p){(*p) = 1;}
    }
}

void 
Mask3D::Select(byte v)
{
    Mask3D::iteratorFast p;
    for (p=begin(); p!=end(); p++)
    {
        if (*p==v){(*p) = 1;}else{*p=0;}
    }
}





#endif //NOTDEF

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